if there's a way that we can clear the missed calls in the logs by calling those missed calls back

Please clarify your question.

I mean when one of call handling member of a queue call gets back to missed calls and clean up them of their extension , those will be clean up from the queue call logs as well.

What is the context. Are you a developer, asking for a way to clean up the call log database or are you a user, looking for options to clean up missed calls from an app etc. I am not aware of the queue call logs, so it would be helpful if you can share the example data.